About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015417-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_015418-T1
LLU|FUN_015419-T1
LLU|FUN_015420-T1PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER
LLU|FUN_015421-T1
LLU|FUN_015422-T1
LLU|FUN_015423-T1
LLU|FUN_015424-T1CYTOKINE RECEPTOR
LLU|FUN_015425-T1SACSIN
LLU|FUN_015426-T1
LLU|FUN_015427-T1SACSIN
LLU|FUN_015428-T1SACSIN
LLU|FUN_015429-T1
LLU|FUN_015430-T1SACSIN
LLU|FUN_015431-T1PDZ DOMAIN-CONTAINING PROTEIN 8
LLU|FUN_015432-T1SACSIN
LLU|FUN_015433-T1CENTROSOMAL PROTEIN OF 44 KDA
LLU|FUN_015434-T1SMALL UBIQUITIN-RELATED MODIFIER
LLU|FUN_015435-T1POLYCOMB GROUP PROTEIN
LLU|FUN_015436-T1WW DOMAIN BINDING PROTEIN 4
LLU|FUN_015437-T1
LLU|FUN_015438-T1
LLU|FUN_015439-T1
LLU|FUN_015440-T1SULFURTRANSFERASE-RELATED
LLU|FUN_015441-T1RING BOX
LLU|FUN_015442-T1HISTIDYL-TRNA SYNTHETASE
LLU|FUN_015443-T1SEC3/SYNTAXIN-RELATED
LLU|FUN_015444-T1
LLU|FUN_015445-T1
LLU|FUN_015446-T1
LLU|FUN_015447-T1
LLU|FUN_015448-T1
LLU|FUN_015449-T1
LLU|FUN_015450-T1
LLU|FUN_015451-T1
LLU|FUN_015452-T1
LLU|FUN_015453-T1
LLU|FUN_015454-T1
LLU|FUN_015455-T1
LLU|FUN_015456-T1
LLU|FUN_015457-T1
LLU|FUN_015458-T1TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED
LLU|FUN_015459-T1UNCHARACTERIZED
LLU|FUN_015460-T1
LLU|FUN_015461-T1CYSTEINE-RICH, ACIDIC INTEGRAL MEMBRANE PROTEIN-RELATED
LLU|FUN_015462-T1
LLU|FUN_015463-T1
LLU|FUN_015464-T1SI:CH211-171H4.7-RELATED
LLU|FUN_015465-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_015466-T1
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