About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015117-T1
LLU|FUN_015118-T1
LLU|FUN_015119-T1
LLU|FUN_015120-T1
LLU|FUN_015121-T1
LLU|FUN_015122-T1
LLU|FUN_015123-T1
LLU|FUN_015124-T1
LLU|FUN_015125-T1L-ASPARAGINASE
LLU|FUN_015126-T1
LLU|FUN_015127-T1
LLU|FUN_015128-T1ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED
LLU|FUN_015129-T1VASOHIBIN-1-LIKE ISOFORM X2
LLU|FUN_015130-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
LLU|FUN_015131-T1MATING RESPONSE PROTEIN POI2
LLU|FUN_015132-T1
LLU|FUN_015133-T1
LLU|FUN_015134-T1
LLU|FUN_015135-T1
LLU|FUN_015136-T1
LLU|FUN_015137-T1
LLU|FUN_015138-T1
LLU|FUN_015139-T1JUN TRANSCRIPTION FACTOR-RELATED
LLU|FUN_015140-T1DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
LLU|FUN_015141-T1ANNEXIN
LLU|FUN_015142-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
LLU|FUN_015143-T1SINGLE STRANDED DNA BINDING PROTEIN
LLU|FUN_015144-T1
LLU|FUN_015145-T1SINGLE STRANDED DNA BINDING PROTEIN
LLU|FUN_015146-T1UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10
LLU|FUN_015147-T1
LLU|FUN_015148-T1
LLU|FUN_015149-T1WD-REPEAT PROTEIN 18
LLU|FUN_015150-T1
LLU|FUN_015151-T1
LLU|FUN_015152-T1
LLU|FUN_015153-T1EPH RECEPTOR A5
LLU|FUN_015154-T1STERILE20-LIKE KINASE, ISOFORM B-RELATED
LLU|FUN_015155-T1
LLU|FUN_015156-T1
LLU|FUN_015157-T1
LLU|FUN_015158-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_015159-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_015160-T1L-THREONINE 3-DEHYDROGENASE
LLU|FUN_015161-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_015162-T1
LLU|FUN_015163-T1POLYCYSTIN-1
LLU|FUN_015164-T1
LLU|FUN_015165-T1
LLU|FUN_015166-T1STANNIOCALCIN
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