About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015017-T1
LLU|FUN_015018-T1TPR REPEAT CONTAINING PROTEIN
LLU|FUN_015019-T1NUCLEAR PORE COMPLEX PROTEIN NUP205
LLU|FUN_015020-T1NAD DEPENDENT EPIMERASE/DEHYDRATASE
LLU|FUN_015021-T1
LLU|FUN_015022-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
LLU|FUN_015023-T1
LLU|FUN_015024-T1
LLU|FUN_015025-T1
LLU|FUN_015026-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_015027-T1
LLU|FUN_015028-T1
LLU|FUN_015029-T1
LLU|FUN_015030-T1RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN
LLU|FUN_015031-T1HEAT SHOCK TRANSCRIPTION FACTOR
LLU|FUN_015032-T1METAXIN RELATED
LLU|FUN_015033-T1M-PHASE PHOSPHOPROTEIN 6
LLU|FUN_015034-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
LLU|FUN_015035-T1
LLU|FUN_015036-T1METALLO PHOSPHOESTERASE RELATED
LLU|FUN_015037-T1UNCHARACTERIZED
LLU|FUN_015038-T1
LLU|FUN_015039-T1
LLU|FUN_015040-T1
LLU|FUN_015041-T1CATION-TRANSPORTING ATPASE-RELATED
LLU|FUN_015042-T1
LLU|FUN_015043-T1
LLU|FUN_015044-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_015045-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_015046-T1
LLU|FUN_015047-T1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
LLU|FUN_015048-T1CRUMBS FAMILY MEMBER
LLU|FUN_015049-T1
LLU|FUN_015050-T1
LLU|FUN_015051-T1
LLU|FUN_015052-T1
LLU|FUN_015053-T1OS10G0105400 PROTEIN
LLU|FUN_015054-T1OS10G0105400 PROTEIN
LLU|FUN_015055-T1PROPERDIN
LLU|FUN_015056-T1
LLU|FUN_015057-T1
LLU|FUN_015058-T1
LLU|FUN_015059-T1
LLU|FUN_015060-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
LLU|FUN_015061-T1
LLU|FUN_015062-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_015063-T1
LLU|FUN_015064-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_015065-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
LLU|FUN_015066-T1FAT ATYPICAL CADHERIN-RELATED
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