About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015167-T1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
LLU|FUN_015168-T1
LLU|FUN_015169-T1TREHALASE
LLU|FUN_015170-T1
LLU|FUN_015171-T1ADIPOGENESIS REGULATORY FACTOR
LLU|FUN_015172-T1
LLU|FUN_015173-T1CONTACTIN 5
LLU|FUN_015174-T1
LLU|FUN_015175-T1
LLU|FUN_015176-T1-
LLU|FUN_015177-T1
LLU|FUN_015178-T1PROTEIN SIDEKICK
LLU|FUN_015179-T1RNA BINDING MOTIF RBM PROTEIN -RELATED
LLU|FUN_015180-T1
LLU|FUN_015181-T1
LLU|FUN_015182-T1
LLU|FUN_015183-T1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_015184-T1PEPTIDYLPROLYL ISOMERASE
LLU|FUN_015185-T1
LLU|FUN_015186-T1
LLU|FUN_015187-T1LARGE PROLINE-RICH PROTEIN BAG6
LLU|FUN_015188-T1ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1
LLU|FUN_015189-T1
LLU|FUN_015190-T1
LLU|FUN_015191-T1
LLU|FUN_015192-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_015193-T1
LLU|FUN_015194-T1TRNA-DIHYDROURIDINE SYNTHASE
LLU|FUN_015195-T1
LLU|FUN_015196-T1
LLU|FUN_015197-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_015198-T1PROGRAMMED CELL DEATH 4
LLU|FUN_015199-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_015200-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_015201-T1
LLU|FUN_015202-T1
LLU|FUN_015203-T1
LLU|FUN_015204-T1CALCIUM BINDING PROTEINS
LLU|FUN_015205-T1
LLU|FUN_015206-T1
LLU|FUN_015207-T1
LLU|FUN_015208-T1
LLU|FUN_015209-T1
LLU|FUN_015210-T1
LLU|FUN_015211-T1NEGATIVE ELONGATION FACTOR A NELF-A
LLU|FUN_015212-T1
LLU|FUN_015213-T1HOMEOBOX PROTEIN NKX
LLU|FUN_015214-T1
LLU|FUN_015215-T1HOMEOBOX PROTEIN NKX
LLU|FUN_015216-T1PEPTIDYLPROLYL ISOMERASE
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