About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015518-T1SYNTROPHIN
LLU|FUN_015519-T1SMALL INTEGRAL MEMBRANE PROTEIN 13
LLU|FUN_015520-T1METALLOPROTEASE TLDD
LLU|FUN_015521-T1
LLU|FUN_015522-T1GALACTOSE-3-O-SULFOTRANSFERASE
LLU|FUN_015523-T160S RIBOSOMAL PROTEIN L22
LLU|FUN_015524-T1AP COMPLEX SUBUNIT MU
LLU|FUN_015525-T1UNCHARACTERIZED
LLU|FUN_015526-T1HEAT SHOCK REGULATED 2
LLU|FUN_015527-T1LD39211P
LLU|FUN_015528-T1LD39211P
LLU|FUN_015529-T1
LLU|FUN_015530-T1UNCHARACTERIZED
LLU|FUN_015531-T1
LLU|FUN_015532-T1
LLU|FUN_015533-T1UNCHARACTERIZED
LLU|FUN_015534-T1UNCHARACTERIZED
LLU|FUN_015535-T1UNCHARACTERIZED
LLU|FUN_015536-T1UNCHARACTERIZED
LLU|FUN_015537-T1
LLU|FUN_015538-T1
LLU|FUN_015539-T1
LLU|FUN_015540-T1OS10G0105400 PROTEIN
LLU|FUN_015541-T1OS10G0105400 PROTEIN
LLU|FUN_015542-T1UNCHARACTERIZED
LLU|FUN_015543-T1
LLU|FUN_015544-T1
LLU|FUN_015545-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_015546-T1
LLU|FUN_015547-T1
LLU|FUN_015548-T1
LLU|FUN_015549-T1
LLU|FUN_015550-T1
LLU|FUN_015551-T1
LLU|FUN_015552-T1
LLU|FUN_015553-T1
LLU|FUN_015554-T1
LLU|FUN_015557-T1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
LLU|FUN_015558-T1PROTEIN CBG07384
LLU|FUN_015559-T1
LLU|FUN_015560-T1
LLU|FUN_015561-T1UNCHARACTERIZED
LLU|FUN_015562-T1
LLU|FUN_015563-T1
LLU|FUN_015564-T1CREG1 PROTEIN
LLU|FUN_015565-T1
LLU|FUN_015566-T1
LLU|FUN_015567-T1
LLU|FUN_015568-T1
LLU|FUN_015569-T1
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