About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015670-T1LD44032P
LLU|FUN_015671-T1
LLU|FUN_015672-T1
LLU|FUN_015673-T1
LLU|FUN_015674-T1
LLU|FUN_015675-T1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
LLU|FUN_015676-T1
LLU|FUN_015677-T1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
LLU|FUN_015678-T1P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED
LLU|FUN_015679-T1UNCHARACTERIZED
LLU|FUN_015680-T1
LLU|FUN_015681-T1BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1
LLU|FUN_015682-T1
LLU|FUN_015683-T1
LLU|FUN_015684-T1
LLU|FUN_015685-T1AMINOMETHYLTRANSFERASE
LLU|FUN_015686-T1SARCOSINE DEHYDROGENASE-RELATED
LLU|FUN_015687-T1SARCOSINE DEHYDROGENASE-RELATED
LLU|FUN_015688-T1AMINOMETHYLTRANSFERASE
LLU|FUN_015689-T1ZINC/IRON TRANSPORTER
LLU|FUN_015690-T1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
LLU|FUN_015691-T1
LLU|FUN_015692-T1
LLU|FUN_015693-T1
LLU|FUN_015694-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_015695-T1
LLU|FUN_015696-T1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
LLU|FUN_015697-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_015698-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_015699-T1
LLU|FUN_015700-T1
LLU|FUN_015701-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_015702-T1
LLU|FUN_015703-T1LYMPHOID-RESTRICTED MEMBRANE PROTEIN, JAW1
LLU|FUN_015704-T1GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
LLU|FUN_015705-T1TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE
LLU|FUN_015706-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_015707-T1ARMADILLO-TYPE FOLD-RELATED
LLU|FUN_015708-T1
LLU|FUN_015709-T1
LLU|FUN_015710-T1NETRIN RECEPTOR UNC5
LLU|FUN_015711-T1NETRIN RECEPTOR UNC5
LLU|FUN_015712-T1
LLU|FUN_015713-T1EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN
LLU|FUN_015714-T1
LLU|FUN_015715-T1FACIOGENITAL DYSPLASIA PROTEIN
LLU|FUN_015716-T1PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
LLU|FUN_015717-T1
LLU|FUN_015718-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_015719-T1
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