About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_015570-T1
LLU|FUN_015571-T1
LLU|FUN_015572-T1
LLU|FUN_015573-T1
LLU|FUN_015574-T1
LLU|FUN_015575-T1
LLU|FUN_015576-T1BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN
LLU|FUN_015577-T1
LLU|FUN_015578-T1
LLU|FUN_015579-T1
LLU|FUN_015580-T1
LLU|FUN_015581-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_015582-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
LLU|FUN_015583-T1
LLU|FUN_015584-T1
LLU|FUN_015585-T1
LLU|FUN_015586-T1SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED
LLU|FUN_015587-T1
LLU|FUN_015588-T1PROTEIN SIDEKICK
LLU|FUN_015589-T1PEPTIDASE
LLU|FUN_015590-T1
LLU|FUN_015591-T1
LLU|FUN_015592-T1
LLU|FUN_015593-T1-
LLU|FUN_015594-T1
LLU|FUN_015595-T1
LLU|FUN_015596-T1
LLU|FUN_015597-T1
LLU|FUN_015598-T1
LLU|FUN_015599-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_015600-T1
LLU|FUN_015601-T1
LLU|FUN_015602-T1ZGC:195170
LLU|FUN_015603-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_015604-T1
LLU|FUN_015605-T1
LLU|FUN_015606-T1
LLU|FUN_015607-T1SIDESTEP PROTEIN
LLU|FUN_015608-T1USP DOMAIN-CONTAINING PROTEIN
LLU|FUN_015609-T1MOLTING PROTEIN MLT-4
LLU|FUN_015610-T1TRANSCRIPTION INITIATION FACTOR IIB-RELATED
LLU|FUN_015611-T1BTB/POZ DOMAIN-CONTAINING
LLU|FUN_015612-T1
LLU|FUN_015613-T1SERINE/THREONINE PROTEIN PHOSPHATASE
LLU|FUN_015614-T1KH DOMAIN CONTAINING RNA BINDING PROTEIN
LLU|FUN_015615-T1TIGHT JUNCTION-ASSOCIATED PROTEIN 1
LLU|FUN_015616-T1PRESENILIN
LLU|FUN_015617-T1PRESENILIN
LLU|FUN_015618-T1
LLU|FUN_015619-T1
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