Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8012121.1 | GABA-B RECEPTOR |
| CAI8012122.1 | GABA-B RECEPTOR |
| CAI8012123.1 | GABA-B RECEPTOR |
| CAI8012124.1 | |
| CAI8012125.1 | |
| CAI8012126.1 | |
| CAI8012127.1 | |
| CAI8012128.1 | |
| CAI8012130.1 | POTE ANKYRIN DOMAIN |
| CAI8012129.1 | POTE ANKYRIN DOMAIN |
| CAI8012131.1 | POTE ANKYRIN DOMAIN |
| CAI8012132.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8012134.1 | SI:DKEY-276J7.1 |
| CAI8012133.1 | SI:DKEY-276J7.1 |
| CAI8012136.1 | TRANSPOSON |
| CAI8012135.1 | TRANSPOSON |
| CAI8012137.1 | |
| CAI8012138.1 | |
| CAI8012139.1 | PROPERDIN |
| CAI8012141.1 | |
| CAI8012140.1 | |
| CAI8012146.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8012145.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8012144.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8012143.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8012142.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8012147.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8012148.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI8012149.1 | |
| CAI8012150.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8012151.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8012152.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8012153.1 | |
| CAI8012154.1 | ANTITOXIN HICB |
| CAI8012155.1 | |
| CAI8012156.1 | BCDNA.GH03377 |
| CAI8012157.1 | |
| CAI8012158.1 | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE |
| CAI8012159.1 | PHYTANOYL-COA DIOXYGENASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_2G03330) |
| CAI8012160.1 | |
| CAI8012162.1 | WD40 REPEAT PROTEIN 4 |
| CAI8012161.1 | WD40 REPEAT PROTEIN 4 |
| CAI8012163.1 | |
| CAI8012164.1 | |
| CAI8012165.1 | |
| CAI8012166.1 | MULTIPLE PDZ DOMAIN PROTEIN |
| CAI8012167.1 | HISTIDINE TRIAD HIT PROTEIN MEMBER |
| CAI8012168.1 | |
| CAI8012169.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8012170.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
