Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8011971.1 | |
| CAI8011972.1 | |
| CAI8011973.1 | |
| CAI8011974.1 | ACETYLORNITHINE DEACETYLASE |
| CAI8011975.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8011976.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8011977.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8011978.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8011979.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8011980.1 | |
| CAI8011981.1 | PROTEIN TOLB HOMOLOG |
| CAI8011982.1 | PROTEIN TOLB HOMOLOG |
| CAI8011983.1 | CEPHALOSPORIN-C DEACETYLASE |
| CAI8011984.1 | |
| CAI8011985.1 | |
| CAI8011986.1 | |
| CAI8011987.1 | SARCOSINE DEHYDROGENASE-RELATED |
| CAI8011988.1 | SULFUR CARRIER PROTEIN THIS |
| CAI8011989.1 | THIAZOLE SYNTHASE |
| CAI8011990.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011991.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011992.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011994.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011993.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011996.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011995.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011997.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011998.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8011999.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8012000.1 | THIAMINE-PHOSPHATE PYROPHOSPHORYLASE |
| CAI8012001.1 | RIBOSOME MATURATION FACTOR RIMM |
| CAI8012003.1 | UPF0109 PROTEIN SCO5592 |
| CAI8012002.1 | UPF0109 PROTEIN SCO5592 |
| CAI8012004.1 | 30S RIBOSOMAL PROTEIN S16 |
| CAI8012005.1 | SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 |
| CAI8012006.1 | PHAGE INTEGRASE-RELATED |
| CAI8012007.1 | ENOLASE |
| CAI8012008.1 | ENOLASE |
| CAI8012009.1 | UVRC/OXIDOREDUCTASE |
| CAI8012010.1 | UNCHARACTERIZED PROTEIN YQGE |
| CAI8012011.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8012012.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8012013.1 | LYSINE/ARGININE/ORNITHINE TRANSPORT SYSTEM KINASE |
| CAI8012014.1 | LYSINE/ARGININE/ORNITHINE TRANSPORT SYSTEM KINASE |
| CAI8012015.1 | |
| CAI8012016.1 | |
| CAI8012017.1 | |
| CAI8012018.1 | TRANSPOSASE INSH FOR INSERTION SEQUENCE ELEMENT IS5A-RELATED |
| CAI8012020.1 | GALECTIN |
| CAI8012019.1 | GALECTIN |
