About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8011673.1PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
CAI8011671.1PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
CAI8011672.1PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
CAI8011674.1PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
CAI8011675.1
CAI8011676.1
CAI8011677.1
CAI8011678.1CYSTEINE-RICH PDZ-BINDING PROTEIN
CAI8011679.1
CAI8011680.1
CAI8011681.1
CAI8011682.1
CAI8011684.1RNA-BINDING MOTIF PROTEIN 14B
CAI8011683.1RNA RECOGNITION MOTIF-CONTAINING
CAI8011685.1
CAI8011686.1
CAI8011689.1GH03947P
CAI8011690.1GH03947P
CAI8011688.1GH03947P
CAI8011687.1GH03947P
CAI8011691.1
CAI8011693.1GH03947P
CAI8011692.1GH03947P
CAI8011695.1GH03947P
CAI8011694.1GH03947P
CAI8011696.1
CAI8011697.1
CAI8011698.1
CAI8011699.1
CAI8011700.1
CAI8011701.1
CAI8011702.1
CAI8011703.1
CAI8011704.1
CAI8011705.1PHOSPHOLIPASE D
CAI8011707.1PHOSPHOLIPASE D
CAI8011706.1PHOSPHOLIPASE D
CAI8011708.1PHOSPHOLIPASE D
CAI8011709.1PHOSPHOLIPASE D
CAI8011710.1
CAI8011711.1
CAI8011712.1
CAI8011713.1GTP-BINDING
CAI8011716.1
CAI8011715.1
CAI8011714.1
CAI8011717.1
CAI8011718.1
CAI8011719.1
CAI8011720.14.1 G PROTEIN
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