Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8011919.1 | |
| CAI8011922.1 | POLY A POLYMERASE |
| CAI8011923.1 | POLY A POLYMERASE |
| CAI8011926.1 | AGAP003327-PA |
| CAI8011925.1 | AGAP003327-PA |
| CAI8011924.1 | AGAP003327-PA |
| CAI8011927.1 | AGAP003327-PA |
| CAI8011928.1 | AGAP003327-PA |
| CAI8011929.1 | AGAP003327-PA |
| CAI8011930.1 | AGAP003327-PA |
| CAI8011931.1 | |
| CAI8011932.1 | |
| CAI8011933.1 | |
| CAI8011934.1 | GTP CYCLOHYDROLASE 1 FEEDBACK REGULATORY PROTEIN |
| CAI8011936.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8011935.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8011938.1 | INOSITOL POLYPHOSPHATE KINASE |
| CAI8011937.1 | |
| CAI8011939.1 | |
| CAI8011940.1 | DULLARD PROTEIN PHOSPHATASE |
| CAI8011941.1 | FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC |
| CAI8011942.1 | NITROGEN REGULATORY PROTEIN P-II |
| CAI8011943.1 | 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE-RELATED |
| CAI8011944.1 | PROTEASE FAMILY S9A OLIGOPEPTIDASE |
| CAI8011945.1 | PROTEASE FAMILY S9A OLIGOPEPTIDASE |
| CAI8011946.1 | HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN |
| CAI8011947.1 | PROTEASE FAMILY S9A OLIGOPEPTIDASE |
| CAI8011948.1 | PROTEASE FAMILY S9A OLIGOPEPTIDASE |
| CAI8011950.1 | DEHYDROGENASES, SHORT CHAIN |
| CAI8011949.1 | DEHYDROGENASES, SHORT CHAIN |
| CAI8011951.1 | - |
| CAI8011952.1 | |
| CAI8011953.1 | |
| CAI8011954.1 | BCDNA.GH03377 |
| CAI8011955.1 | |
| CAI8011956.1 | MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC |
| CAI8011957.1 | ARYLSULFATASE FAMILY MEMBER |
| CAI8011958.1 | |
| CAI8011959.1 | SULFATASE |
| CAI8011960.1 | 6-PHOSPHOGLUCONOLACTONASE-RELATED |
| CAI8011961.1 | NUCLEOTIDE PYROPHOSPHOHYDROLASE |
| CAI8011962.1 | 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE |
| CAI8011963.1 | |
| CAI8011964.1 | |
| CAI8011965.1 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
| CAI8011966.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| CAI8011967.1 | |
| CAI8011968.1 | GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED |
| CAI8011969.1 | 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE |
| CAI8011970.1 | GENERAL SECRETION PATHWAY PROTEIN G |
