Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8011871.1 | S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE |
| CAI8011872.1 | |
| CAI8011873.1 | |
| CAI8011874.1 | PQQ ENZYME REPEAT PROTEIN-RELATED |
| CAI8011875.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI8011876.1 | QUORUM-QUENCHING LACTONASE YTNP-RELATED-RELATED |
| CAI8011878.1 | ADENINE PHOSPHORIBOSYLTRANSFERASE |
| CAI8011877.1 | ADENINE PHOSPHORIBOSYLTRANSFERASE |
| CAI8011879.1 | UPF0102 PROTEIN YRAN |
| CAI8011880.1 | TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE |
| CAI8011881.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8011885.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8011884.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8011883.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8011882.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8011887.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8011886.1 | |
| CAI8011888.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8011889.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| CAI8011890.1 | |
| CAI8011891.1 | |
| CAI8011892.1 | |
| CAI8011893.1 | |
| CAI8011894.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8011895.1 | |
| CAI8011899.1 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| CAI8011898.1 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| CAI8011897.1 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| CAI8011896.1 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| CAI8011900.1 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| CAI8011901.1 | |
| CAI8011902.1 | |
| CAI8011903.1 | |
| CAI8011905.1 | RUBY-EYE2-LIKE PROTEIN |
| CAI8011904.1 | RUBY-EYE2-LIKE PROTEIN |
| CAI8011906.1 | RUBY-EYE2-LIKE PROTEIN |
| CAI8011908.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8011907.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8011909.1 | ALDOSE-1-EPIMERASE |
| CAI8011910.1 | |
| CAI8011911.1 | |
| CAI8011912.1 | |
| CAI8011914.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| CAI8011913.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| CAI8011918.1 | POLY A POLYMERASE |
| CAI8011916.1 | POLY A POLYMERASE |
| CAI8011917.1 | POLY A POLYMERASE |
| CAI8011915.1 | POLY A POLYMERASE |
| CAI8011921.1 | POLY A POLYMERASE |
| CAI8011920.1 | POLY A POLYMERASE |
