Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8012072.1 | KREV INTERACTION TRAPPED 1-RELATED |
| CAI8012071.1 | KREV INTERACTION TRAPPED 1-RELATED |
| CAI8012070.1 | |
| CAI8012074.1 | |
| CAI8012076.1 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
| CAI8012075.1 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
| CAI8012078.1 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
| CAI8012077.1 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
| CAI8012080.1 | LD21662P |
| CAI8012079.1 | LD21662P |
| CAI8012081.1 | LD21662P |
| CAI8012082.1 | LD21662P |
| CAI8012083.1 | LD21662P |
| CAI8012084.1 | LD21662P |
| CAI8012085.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| CAI8012086.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| CAI8012087.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| CAI8012088.1 | |
| CAI8012089.1 | |
| CAI8012090.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 181 |
| CAI8012091.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 181 |
| CAI8012092.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 181 |
| CAI8012093.1 | |
| CAI8012094.1 | SERINE/THREONINE-PROTEIN KINASE ATM |
| CAI8012095.1 | |
| CAI8012096.1 | |
| CAI8012097.1 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| CAI8012098.1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| CAI8012099.1 | PHENAZINE BIOSYNTHESIS PROTEIN |
| CAI8012100.1 | SI:DKEY-19B23.12-RELATED |
| CAI8012101.1 | SI:DKEY-19B23.12-RELATED |
| CAI8012102.1 | SI:DKEY-19B23.12-RELATED |
| CAI8012104.1 | |
| CAI8012103.1 | |
| CAI8012105.1 | |
| CAI8012106.1 | |
| CAI8012107.1 | |
| CAI8012108.1 | |
| CAI8012109.1 | |
| CAI8012110.1 | |
| CAI8012111.1 | |
| CAI8012112.1 | |
| CAI8012113.1 | |
| CAI8012116.1 | GABA-B RECEPTOR |
| CAI8012115.1 | GABA-B RECEPTOR |
| CAI8012114.1 | GABA-B RECEPTOR |
| CAI8012117.1 | GABA-B RECEPTOR |
| CAI8012118.1 | |
| CAI8012119.1 | |
| CAI8012120.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
