About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_36956-0.11PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_36960-0.3
Bpl_scaf_36963-0.7
Bpl_scaf_36963-1.11TELOMERE-ASSOCIATED PROTEIN RIF1
Bpl_scaf_36963-1.13
Bpl_scaf_36963-1.9
Bpl_scaf_36963-2.17GUANYLYL CYCLASE
Bpl_scaf_36963-2.5GUANYLYL CYCLASE
Bpl_scaf_36963-3.8BETA1,3-GALACTOSYLTRANSFERASE
Bpl_scaf_36963-3.9PROTEIN DISULFIDE ISOMERASE
Bpl_scaf_36964-0.4
Bpl_scaf_36964-1.10SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_36964-1.14
Bpl_scaf_36964-1.3
Bpl_scaf_36964-1.8
Bpl_scaf_36964-1.9SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_36964-10.4
Bpl_scaf_36964-10.5
Bpl_scaf_36964-11.16DYNEIN HEAVY CHAIN
Bpl_scaf_36964-2.10
Bpl_scaf_36964-2.5SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_36964-2.8
Bpl_scaf_36964-2.9
Bpl_scaf_36964-3.18
Bpl_scaf_36964-3.19
Bpl_scaf_36964-3.20
Bpl_scaf_36964-3.21
Bpl_scaf_36964-3.22
Bpl_scaf_36964-5.7
Bpl_scaf_36964-6.0
Bpl_scaf_36964-8.4
Bpl_scaf_36964-9.15MUCIN 4-RELATED
Bpl_scaf_36964-9.20CHOLINE/ETHANOALAMINE KINASE
Bpl_scaf_36964-9.23PUTATIVE-RELATED
Bpl_scaf_36964-9.7TRANSMEMBRANE PROTEIN
Bpl_scaf_36966-0.3
Bpl_scaf_36972-0.7PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_36973-0.3RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_36974-0.3IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36974-0.4
Bpl_scaf_36974-1.1940S RIBOSOMAL PROTEIN S3A
Bpl_scaf_36974-1.26SIDESTEP PROTEIN
Bpl_scaf_36974-1.27SIDESTEP PROTEIN
Bpl_scaf_36974-2.11
Bpl_scaf_36974-2.12
Bpl_scaf_36974-2.3DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_36974-3.12
Bpl_scaf_36974-3.34
Bpl_scaf_36974-3.44REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36974-3.51CYTOCHROME P450 508A4-RELATED
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