About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_37403-0.13LD24721P
Bpl_scaf_37403-0.7EXPRESSED PROTEIN
Bpl_scaf_3741-0.11
Bpl_scaf_3741-0.14CBP/P300-RELATED
Bpl_scaf_37420-0.0
Bpl_scaf_37420-0.1
Bpl_scaf_37420-1.19
Bpl_scaf_37420-1.23
Bpl_scaf_37420-1.24
Bpl_scaf_37420-1.3
Bpl_scaf_37430-0.10
Bpl_scaf_37430-1.6CONTACTIN 5
Bpl_scaf_37433-0.0SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_37439-0.1SPLICING FACTOR 3B, SUBUNIT 1-RELATED
Bpl_scaf_37440-1.15BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_37440-1.16BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_37440-1.7CARBOXYLESTERASE
Bpl_scaf_37440-1.8
Bpl_scaf_37446-0.7G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_37446-1.16ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_37446-1.40G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_37447-0.0
Bpl_scaf_37447-0.1LD33804P
Bpl_scaf_37447-1.1LD33804P
Bpl_scaf_37447-1.2LD33804P
Bpl_scaf_37447-2.0G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_37447-3.8G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_37447-4.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_37447-7.2
Bpl_scaf_37447-7.25
Bpl_scaf_37447-7.29UNCHARACTERIZED
Bpl_scaf_37447-7.3
Bpl_scaf_37447-7.33
Bpl_scaf_3745-0.10
Bpl_scaf_3745-0.9
Bpl_scaf_37458-0.0
Bpl_scaf_37458-1.0
Bpl_scaf_37458-1.13ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_37470-0.1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_37470-0.2TOLL-LIKE RECEPTOR
Bpl_scaf_37470-1.0LD33804P
Bpl_scaf_37470-1.15
Bpl_scaf_37476-0.0
Bpl_scaf_37484-0.13TELOMERIC REPEAT-BINDING FACTOR 2 TERF2
Bpl_scaf_37484-0.6
Bpl_scaf_37484-1.17
Bpl_scaf_37484-1.18F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
Bpl_scaf_37484-1.5
Bpl_scaf_37484-1.6
Bpl_scaf_37489-0.0BONUS, ISOFORM C-RELATED
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