About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_37235-0.5
Bpl_scaf_37235-0.6
Bpl_scaf_37239-0.4ADENOSINE DEAMINASE
Bpl_scaf_37249-0.13CYTOCHROME P450 508A4-RELATED
Bpl_scaf_37249-0.15SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Bpl_scaf_37284-0.11RAS-LIKE FAMILY MEMBER 11
Bpl_scaf_37284-0.17
Bpl_scaf_37284-0.9CDC37-RELATED
Bpl_scaf_37293-0.18G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_37293-0.27
Bpl_scaf_37293-0.28
Bpl_scaf_37293-0.29G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_37298-0.3DELTA(14)-STEROL REDUCTASE
Bpl_scaf_37298-0.5
Bpl_scaf_37298-0.6
Bpl_scaf_37298-0.7THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Bpl_scaf_37314-0.7
Bpl_scaf_37323-0.3AMINO ACID TRANSPORTER
Bpl_scaf_37323-0.8
Bpl_scaf_37323-0.9AMINO ACID TRANSPORTER
Bpl_scaf_37332-0.1
Bpl_scaf_37332-0.7AGAP000124-PA
Bpl_scaf_37332-0.9
Bpl_scaf_37348-0.18PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_37348-0.21LIPOXYGENASE
Bpl_scaf_37348-0.27
Bpl_scaf_37356-0.10
Bpl_scaf_37362-0.11
Bpl_scaf_37362-0.17PATCHED-RELATED
Bpl_scaf_37362-0.3
Bpl_scaf_37362-0.7-
Bpl_scaf_37372-0.10
Bpl_scaf_37372-0.9
Bpl_scaf_37373-0.4ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_37373-0.5
Bpl_scaf_37373-0.6HILLARIN
Bpl_scaf_37373-0.8
Bpl_scaf_37373-1.3APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_37373-2.3ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Bpl_scaf_37373-3.6LOC100145250 PROTEIN
Bpl_scaf_37373-5.1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_37373-5.3DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_37373-6.1
Bpl_scaf_37373-6.12DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_37373-6.8
Bpl_scaf_37374-0.0
Bpl_scaf_37374-0.10
Bpl_scaf_37393-0.12DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_37393-0.6
Bpl_scaf_37403-0.12TPR REPEAT CONTAINING PROTEIN
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