About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_36974-3.52CYTOCHROME P450 508A4-RELATED
Bpl_scaf_36974-3.54CYTOCHROME P450 508A4-RELATED
Bpl_scaf_36974-3.55HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36977-0.6
Bpl_scaf_36987-0.3ELONGATION FACTOR G, MITOCHONDRIAL
Bpl_scaf_36989-0.1
Bpl_scaf_36989-0.2
Bpl_scaf_36989-0.4THAP DOMAIN PROTEIN
Bpl_scaf_36996-0.4PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Bpl_scaf_37001-0.5
Bpl_scaf_37043-0.5
Bpl_scaf_37044-0.0
Bpl_scaf_37044-0.3UNCHARACTERIZED
Bpl_scaf_37044-1.5NANOS PROTEIN
Bpl_scaf_37044-1.7SNARE PROTEINS
Bpl_scaf_37044-1.8SEC31-RELATED PROTEIN
Bpl_scaf_37044-4.7RAP1 GTPASE-GDP DISSOCIATION STIMULATOR 1
Bpl_scaf_37044-4.8ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
Bpl_scaf_37045-0.1
Bpl_scaf_3705-0.13
Bpl_scaf_3705-0.15
Bpl_scaf_3705-1.1
Bpl_scaf_3705-1.6SEC14 RELATED PROTEIN
Bpl_scaf_3705-1.9
Bpl_scaf_3705-2.2SEC14 RELATED PROTEIN
Bpl_scaf_3705-3.13SEC14 RELATED PROTEIN
Bpl_scaf_3705-3.14CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Bpl_scaf_3705-3.15
Bpl_scaf_3705-4.5
Bpl_scaf_3705-4.7
Bpl_scaf_3705-4.9
Bpl_scaf_37061-0.4THYMIDYLATE KINASE
Bpl_scaf_37074-0.0
Bpl_scaf_37083-0.1
Bpl_scaf_37089-0.0CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
Bpl_scaf_37098-0.3TETRASPANIN
Bpl_scaf_37104-0.1
Bpl_scaf_37122-0.16
Bpl_scaf_37122-0.6SEC14 RELATED PROTEIN
Bpl_scaf_3713-0.2POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_37138-0.4
Bpl_scaf_37138-0.5
Bpl_scaf_37149-0.2OS10G0105400 PROTEIN
Bpl_scaf_37158-0.5
Bpl_scaf_37177-0.3
Bpl_scaf_37216-0.3FOLYLPOLYGLUTAMATE SYNTHASE-RELATED
Bpl_scaf_37226-0.10
Bpl_scaf_37226-0.11RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_37226-0.12
Bpl_scaf_37226-0.9RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
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