About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_36629-1.2TRNA METHYLTRANSFERASE
Bpl_scaf_36629-1.4TRNA METHYLTRANSFERASE
Bpl_scaf_36637-0.4
Bpl_scaf_36638-0.12
Bpl_scaf_36638-0.13
Bpl_scaf_36638-0.3
Bpl_scaf_36638-1.0
Bpl_scaf_36638-1.15UNCHARACTERIZED
Bpl_scaf_36638-1.16PROTEIN INTURNED
Bpl_scaf_36638-1.4
Bpl_scaf_36638-1.7
Bpl_scaf_36650-0.14
Bpl_scaf_36650-0.15
Bpl_scaf_36650-0.17
Bpl_scaf_36650-0.25
Bpl_scaf_36650-1.31
Bpl_scaf_36650-1.32
Bpl_scaf_36650-1.37
Bpl_scaf_36650-1.38
Bpl_scaf_36650-1.39
Bpl_scaf_3666-0.2
Bpl_scaf_36660-0.13COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_36660-1.1
Bpl_scaf_36660-1.7UNCHARACTERIZED
Bpl_scaf_36666-0.10
Bpl_scaf_36666-0.11
Bpl_scaf_36666-0.12
Bpl_scaf_36666-1.17SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_36666-1.18
Bpl_scaf_36666-1.21SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_36666-1.22
Bpl_scaf_36666-1.23POLYCYSTIN FAMILY MEMBER
Bpl_scaf_3667-0.4SOLUTE CARRIER FAMILY 40 MEMBER
Bpl_scaf_36677-0.0
Bpl_scaf_36681-1.0
Bpl_scaf_36681-1.1
Bpl_scaf_36684-0.0SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36687-0.1
Bpl_scaf_36687-1.1
Bpl_scaf_36687-1.18BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_36687-1.22
Bpl_scaf_36687-1.23METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_36687-1.24
Bpl_scaf_36688-0.21
Bpl_scaf_36688-0.22RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36688-0.3
Bpl_scaf_36688-0.4
Bpl_scaf_36688-1.3
Bpl_scaf_36688-2.1MICROTUBULE-ASSOCIATED PROTEIN
Bpl_scaf_36688-2.2
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