About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_36395-0.0
Bpl_scaf_36411-0.2
Bpl_scaf_3642-0.2
Bpl_scaf_3642-1.0
Bpl_scaf_3642-1.4DIPHTHAMIDE BIOSYNTHESIS PROTEIN
Bpl_scaf_36421-0.0
Bpl_scaf_36421-0.13REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36421-0.14
Bpl_scaf_3643-0.2ADENYLATE CYCLASE TYPE 1
Bpl_scaf_3643-10.1
Bpl_scaf_3643-11.11
Bpl_scaf_3643-12.10METHYLTRANSFERASE, FKBM FAMILY PROTEIN
Bpl_scaf_3643-12.15
Bpl_scaf_3643-12.16
Bpl_scaf_3643-12.18DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_3643-13.0
Bpl_scaf_3643-13.5
Bpl_scaf_3643-2.17
Bpl_scaf_3643-2.21CORDON-BLEU
Bpl_scaf_3643-2.22CORDON-BLEU
Bpl_scaf_3643-3.5
Bpl_scaf_3643-3.6
Bpl_scaf_3643-4.12
Bpl_scaf_3643-4.17CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN
Bpl_scaf_3643-4.18CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN
Bpl_scaf_3643-5.2AGAP007109-PA
Bpl_scaf_3643-5.7CHITIN SYNTHASE
Bpl_scaf_3643-6.3UNCHARACTERIZED DUF1308
Bpl_scaf_3643-6.4
Bpl_scaf_3643-6.5TUBULIN
Bpl_scaf_3643-7.2REVERSE TRANSCRIPTASE
Bpl_scaf_3643-8.6CALCIUM BINDING PROTEINS
Bpl_scaf_3643-9.10
Bpl_scaf_3643-9.9
Bpl_scaf_36436-0.10CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN
Bpl_scaf_36436-0.15
Bpl_scaf_36437-0.14ATP-DEPENDENT RNA HELICASE DBP3
Bpl_scaf_36437-0.3
Bpl_scaf_36437-0.9ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36437-1.4CALICYLIN BINDING PROTEIN
Bpl_scaf_36437-1.5DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
Bpl_scaf_36437-3.7CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
Bpl_scaf_36437-4.6VESICLE-TRAFFICKING PROTEIN SEC22B
Bpl_scaf_36437-5.13
Bpl_scaf_36448-0.2PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36448-0.6
Bpl_scaf_36449-0.20
Bpl_scaf_36449-1.19STERILE20-LIKE KINASE, ISOFORM B-RELATED
Bpl_scaf_36449-1.4CENTROSOMAL PROTEIN OF 19K CEP19
Bpl_scaf_36449-1.5BRCA2-INTERACTING TRANSCRIPTIONAL REPRESSOR EMSY
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