About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_35997-1.5MOLTING PROTEIN MLT-4
Bpl_scaf_35997-1.8
Bpl_scaf_35997-1.9A-KINASE-INTERACTING PROTEIN 1
Bpl_scaf_35999-0.1NLPC_P60 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_35999-1.13CEREBELLIN-RELATED
Bpl_scaf_35999-1.19ZYX102 PROTEIN
Bpl_scaf_35999-1.20
Bpl_scaf_35999-1.21
Bpl_scaf_35999-1.22
Bpl_scaf_35999-1.24CEREBELLIN-RELATED
Bpl_scaf_35999-1.8
Bpl_scaf_36-0.1
Bpl_scaf_360-0.0
Bpl_scaf_360-0.3PROTEIN STAR
Bpl_scaf_36006-0.2
Bpl_scaf_36008-0.4OS10G0105400 PROTEIN
Bpl_scaf_36008-0.5
Bpl_scaf_36008-1.10SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36008-1.8SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36008-1.9SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_36015-0.15
Bpl_scaf_36015-1.1
Bpl_scaf_36015-1.20
Bpl_scaf_36015-1.21
Bpl_scaf_36015-1.22
Bpl_scaf_36020-0.3SYNAPTOTAGMIN
Bpl_scaf_36020-1.15GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
Bpl_scaf_36022-0.5CONTACTIN 5
Bpl_scaf_36028-0.10BONUS, ISOFORM C-RELATED
Bpl_scaf_36028-0.11BONUS, ISOFORM C-RELATED
Bpl_scaf_36028-1.19BONUS, ISOFORM C-RELATED
Bpl_scaf_36028-1.21BONUS, ISOFORM C-RELATED
Bpl_scaf_36028-1.22BONUS, ISOFORM C-RELATED
Bpl_scaf_36028-1.6
Bpl_scaf_36036-0.14NEPHRIN
Bpl_scaf_36036-0.16ENDONUCLEASE-RELATED
Bpl_scaf_36036-0.7
Bpl_scaf_36036-0.9
Bpl_scaf_36036-1.11VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Bpl_scaf_36036-1.8
Bpl_scaf_36036-2.9
Bpl_scaf_36039-0.2PROPERDIN
Bpl_scaf_36041-0.1TRANSPOSON
Bpl_scaf_36041-0.3ZINC FINGER AND BTB DOMAIN-CONTAINING
Bpl_scaf_36046-0.1
Bpl_scaf_36046-0.2
Bpl_scaf_36046-0.3
Bpl_scaf_36046-0.4
Bpl_scaf_36046-1.1
Bpl_scaf_36046-1.8
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