About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_35773-0.5ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_35773-0.9ANKYRIN REPEAT PROTEIN
Bpl_scaf_35780-0.1
Bpl_scaf_35789-0.24INNEXIN
Bpl_scaf_35795-0.8
Bpl_scaf_35809-0.4
Bpl_scaf_35817-0.0
Bpl_scaf_35817-0.1
Bpl_scaf_35817-0.2
Bpl_scaf_35826-0.6
Bpl_scaf_35826-0.8
Bpl_scaf_35834-0.35
Bpl_scaf_35834-0.36FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_35834-0.51FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_35834-0.52
Bpl_scaf_35834-0.6SOLUTE CARRIER FAMILY 25
Bpl_scaf_35834-0.8FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_35843-0.1PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44
Bpl_scaf_35852-0.6CARBOXYLESTERASE
Bpl_scaf_35856-0.21L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_35856-0.4SACSIN
Bpl_scaf_35856-0.8
Bpl_scaf_35865-0.6HISTONE-LYSINE N-METHYLTRANSFERASE E(Z)
Bpl_scaf_35869-0.0WSCD FAMILY MEMBER CG9164
Bpl_scaf_35869-0.1
Bpl_scaf_35869-0.12
Bpl_scaf_35869-0.2
Bpl_scaf_35869-0.22
Bpl_scaf_35869-0.5
Bpl_scaf_35869-0.9
Bpl_scaf_35876-0.0
Bpl_scaf_35876-0.14SODIUM-BILE ACID COTRANSPORTER
Bpl_scaf_35876-0.7SODIUM-BILE ACID COTRANSPORTER
Bpl_scaf_35876-0.9
Bpl_scaf_35877-0.7UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE
Bpl_scaf_35877-0.8BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_35877-1.10ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.
Bpl_scaf_35877-1.18UBIQUILIN
Bpl_scaf_35877-1.9IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG
Bpl_scaf_35877-2.15
Bpl_scaf_35877-2.17
Bpl_scaf_35877-2.2
Bpl_scaf_35877-2.3
Bpl_scaf_35877-2.5
Bpl_scaf_35877-2.6
Bpl_scaf_35877-3.15PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE
Bpl_scaf_35877-3.9
Bpl_scaf_35877-4.14UNCHARACTERIZED
Bpl_scaf_35877-4.2
Bpl_scaf_35877-4.9INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 1-BINDING PROTEIN 1
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