About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_35323-0.0
Bpl_scaf_35323-0.1
Bpl_scaf_35327-0.4UNCHARACTERIZED
Bpl_scaf_35327-1.10
Bpl_scaf_35327-1.5CENTROSOMAL PROTEIN OF 41 KDA
Bpl_scaf_35327-1.7SARCOMA ANTIGEN NY-SAR-23
Bpl_scaf_35327-2.12
Bpl_scaf_35327-2.15
Bpl_scaf_35327-2.18
Bpl_scaf_35327-2.22
Bpl_scaf_35327-2.3UNCHARACTERIZED
Bpl_scaf_3539-0.0HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_3539-1.26
Bpl_scaf_3539-1.27TUMOR NECROSIS FACTOR FAMILY MEMBER
Bpl_scaf_3539-1.6ZINC FINGER AND SCAN DOMAIN-CONTAINING
Bpl_scaf_3539-2.12
Bpl_scaf_3539-2.13
Bpl_scaf_3540-0.3MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Bpl_scaf_3541-0.1
Bpl_scaf_3544-0.1
Bpl_scaf_3548-1.3
Bpl_scaf_35485-0.4
Bpl_scaf_35485-0.5
Bpl_scaf_35486-0.11
Bpl_scaf_35486-0.13
Bpl_scaf_35486-0.24TUMOR ENDOTHELIAL MARKER 7 RELATED
Bpl_scaf_35486-0.25TUMOR ENDOTHELIAL MARKER 7 RELATED
Bpl_scaf_35486-0.30
Bpl_scaf_35487-0.3
Bpl_scaf_35487-0.4ZINC ION BINDING PROTEIN
Bpl_scaf_35487-1.12
Bpl_scaf_35487-1.15DNA POLYMERASE I
Bpl_scaf_35487-1.16CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B
Bpl_scaf_35487-1.20
Bpl_scaf_35487-3.15
Bpl_scaf_35487-3.21CALCIUM-RESPONSIVE TRANSCRIPTION FACTOR
Bpl_scaf_35487-3.22ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED
Bpl_scaf_35487-3.40
Bpl_scaf_35488-0.9PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_35493-0.3
Bpl_scaf_35494-0.2
Bpl_scaf_35496-0.4LYSYL-TRNA SYNTHETASE
Bpl_scaf_35496-1.11UNCHARACTERIZED
Bpl_scaf_35496-1.7FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Bpl_scaf_35496-2.0SPERMATOGENESIS-ASSOCIATED PROTEIN 48
Bpl_scaf_35496-2.3
Bpl_scaf_35496-3.4LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73
Bpl_scaf_35497-1.1
Bpl_scaf_35497-1.33ALPHA-GLUCOSIDASE
Bpl_scaf_35497-1.34ALPHA-GLUCOSIDASE
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