About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_34834-1.7ACETYL-COA C-ACYLTRANSFERASE
Bpl_scaf_34834-3.6E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
Bpl_scaf_34834-4.8DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
Bpl_scaf_34834-4.9
Bpl_scaf_34841-0.2
Bpl_scaf_34841-0.3
Bpl_scaf_34841-0.6
Bpl_scaf_34841-0.7
Bpl_scaf_34857-0.0DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_34879-0.6STEERIN
Bpl_scaf_34879-0.7DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Bpl_scaf_34879-0.8DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Bpl_scaf_34879-1.2STEERIN
Bpl_scaf_34879-4.10
Bpl_scaf_34879-4.121-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
Bpl_scaf_34879-4.15GDP-L-FUCOSE SYNTHASE
Bpl_scaf_34879-4.16TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER
Bpl_scaf_34879-4.17
Bpl_scaf_34879-4.20TRANSCRIPTION FACTOR E2F
Bpl_scaf_34879-4.33
Bpl_scaf_3488-0.20PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_3488-0.21PUTATIVE-RELATED
Bpl_scaf_3488-0.22
Bpl_scaf_3488-0.6PARANEOPLASTIC ANTIGEN
Bpl_scaf_3488-1.12
Bpl_scaf_3488-1.14
Bpl_scaf_34884-0.2
Bpl_scaf_3489-0.13MIXED LINEAGE PROTEIN KINASE
Bpl_scaf_3489-0.35TUBULIN
Bpl_scaf_3489-0.36TUBULIN
Bpl_scaf_3489-0.37TUBULIN
Bpl_scaf_3489-1.10GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL
Bpl_scaf_3489-1.1160 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL
Bpl_scaf_3489-1.2110 KDA HEAT SHOCK PROTEIN
Bpl_scaf_34904-0.0
Bpl_scaf_34904-0.1
Bpl_scaf_34908-0.0
Bpl_scaf_34918-2.1I-KAPPA-B-LIKE PROTEIN IKBL
Bpl_scaf_34918-2.6I-KAPPA-B-LIKE PROTEIN IKBL
Bpl_scaf_34918-3.23CHITINASE
Bpl_scaf_34918-3.3CHITINASE
Bpl_scaf_34918-3.5MITOGUARDIN
Bpl_scaf_34918-4.17GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_34918-4.18
Bpl_scaf_34918-4.19SOLUTE CARRIER FAMILY 5
Bpl_scaf_34918-4.21DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_34918-4.50DIMETHYLANILINE MONOOXYGENASE
Bpl_scaf_34918-4.8
Bpl_scaf_34935-0.0
Bpl_scaf_34935-0.12
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