About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_34471-1.11
Bpl_scaf_34480-0.0
Bpl_scaf_34481-0.0RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_34482-0.4HYPERKINETIC, ISOFORM M
Bpl_scaf_34482-1.6HERMANSKY-PUDLAK SYNDROME 3 PROTEIN
Bpl_scaf_34482-1.8HERMANSKY-PUDLAK SYNDROME 3 PROTEIN
Bpl_scaf_34492-0.0
Bpl_scaf_34493-1.7ENDONUCLEASE-RELATED
Bpl_scaf_34498-0.0AMPHIPHYSIN
Bpl_scaf_34501-0.0APONTIC
Bpl_scaf_34501-0.3VESICLE PROTEIN SORTING-ASSOCIATED
Bpl_scaf_34501-1.12
Bpl_scaf_34501-1.17TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Bpl_scaf_34501-1.9PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_34506-0.6
Bpl_scaf_34506-0.8POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_34506-0.9EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_34506-1.25FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN
Bpl_scaf_34506-1.26POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_34506-1.27POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_34506-1.28POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_34506-1.29
Bpl_scaf_34506-1.30
Bpl_scaf_34514-0.0
Bpl_scaf_34514-0.3
Bpl_scaf_34514-1.8
Bpl_scaf_34514-1.9
Bpl_scaf_34515-0.4ADP RIBOSYLATION FACTOR-RELATED
Bpl_scaf_34515-1.7
Bpl_scaf_34515-1.8
Bpl_scaf_34520-0.0
Bpl_scaf_34526-0.3HEH2P
Bpl_scaf_34526-0.7NF-KAPPA-B INHIBITOR ALPHA
Bpl_scaf_34526-0.8ASPARTATE AMINOTRANSFERASE
Bpl_scaf_34526-1.11UNC-13-4A, ISOFORM B
Bpl_scaf_34526-1.12
Bpl_scaf_34526-1.5
Bpl_scaf_34528-0.0
Bpl_scaf_3453-0.0
Bpl_scaf_3453-0.12
Bpl_scaf_3453-0.15
Bpl_scaf_3453-0.27
Bpl_scaf_3453-0.28
Bpl_scaf_34531-0.14CEREBELLIN-RELATED
Bpl_scaf_34531-1.14CEREBELLIN-RELATED
Bpl_scaf_34531-1.22
Bpl_scaf_34531-1.27
Bpl_scaf_34531-1.49CEREBELLIN-RELATED
Bpl_scaf_34531-1.50CEREBELLIN-RELATED
Bpl_scaf_34531-1.51CEREBELLIN-RELATED
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