About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_34531-1.52CEREBELLIN-RELATED
Bpl_scaf_34540-0.0
Bpl_scaf_34540-0.6PROTEIN CBG26694
Bpl_scaf_34540-1.11INHIBITOR OF APOPTOSIS
Bpl_scaf_34540-1.15MUCIN 4-RELATED
Bpl_scaf_34540-1.34G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_34540-1.40MUCIN 4-RELATED
Bpl_scaf_34540-1.43CALCIUM BINDING PROTEINS
Bpl_scaf_34546-1.0
Bpl_scaf_34568-0.3SYNAPTOTAGMIN
Bpl_scaf_34568-0.4SYNAPTOTAGMIN
Bpl_scaf_34568-2.3EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_34569-0.0
Bpl_scaf_34570-0.2ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_34573-0.1CADHERIN-23
Bpl_scaf_34576-0.2COLLAGEN ALPHA
Bpl_scaf_34577-0.2
Bpl_scaf_34579-0.2
Bpl_scaf_34579-0.7
Bpl_scaf_34579-0.8
Bpl_scaf_34579-1.5
Bpl_scaf_34579-2.12SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_34579-2.13CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
Bpl_scaf_3458-0.16TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER
Bpl_scaf_3458-0.21ATP-DEPENDENT DNA HELICASE
Bpl_scaf_3458-0.23COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_34586-0.0
Bpl_scaf_34589-1.2PROTEIN CBG23764
Bpl_scaf_34589-1.5
Bpl_scaf_34589-2.10
Bpl_scaf_34589-2.15
Bpl_scaf_34589-2.27TRANSPOSON
Bpl_scaf_34589-2.28
Bpl_scaf_34589-2.29HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Bpl_scaf_34593-0.4
Bpl_scaf_34598-0.3FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_34598-1.10
Bpl_scaf_34598-1.8
Bpl_scaf_34598-2.14ANKYRIN REPEAT PROTEIN
Bpl_scaf_34598-2.15PROTON CHANNEL OTOP
Bpl_scaf_34598-2.22
Bpl_scaf_34598-2.24UNCHARACTERIZED
Bpl_scaf_3469-0.15
Bpl_scaf_3469-0.22THAP DOMAIN-CONTAINING
Bpl_scaf_3469-0.23
Bpl_scaf_3469-0.25CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_3469-0.26
Bpl_scaf_3470-0.0RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_3470-2.13PROTEIN TORNADO 1
Bpl_scaf_3470-2.14
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