About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_34230-0.17
Bpl_scaf_34230-0.18
Bpl_scaf_34230-0.19DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Bpl_scaf_34230-0.7
Bpl_scaf_34239-0.4RIBONUCLEASE
Bpl_scaf_34255-0.8
Bpl_scaf_34265-0.13PROPERDIN
Bpl_scaf_34265-0.14
Bpl_scaf_3427-0.2RAN GUANINE NUCLEOTIDE RELEASE FACTOR
Bpl_scaf_3427-0.3ANOCTAMIN
Bpl_scaf_34276-0.0
Bpl_scaf_34276-0.1
Bpl_scaf_34276-0.11L-ASPARAGINASE
Bpl_scaf_34276-0.4
Bpl_scaf_34276-0.6
Bpl_scaf_34276-0.9
Bpl_scaf_3428-0.8AGAP008170-PA
Bpl_scaf_3428-1.4
Bpl_scaf_3428-2.7EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Bpl_scaf_3428-2.8TTC17 PROTEIN
Bpl_scaf_3428-3.15RIBOSOMAL PROTEIN S15P/S13E
Bpl_scaf_3428-3.9MALE STERILITY PROTEIN 2-RELATED
Bpl_scaf_3428-4.11
Bpl_scaf_3428-4.12SODIUM/HYDROGEN EXCHANGER
Bpl_scaf_3428-4.13TETRASPANIN
Bpl_scaf_3428-5.6ETS
Bpl_scaf_3428-5.7PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Bpl_scaf_3428-6.12CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_3428-6.16FI23527P1
Bpl_scaf_3428-6.17PLAKOPHILLIN-RELATED
Bpl_scaf_3428-6.20TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_34286-0.3SI:DKEY-31G6.6
Bpl_scaf_34286-0.4CONTACTIN 5
Bpl_scaf_34294-0.0
Bpl_scaf_34294-0.3
Bpl_scaf_34294-0.4SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_34294-0.7
Bpl_scaf_34304-0.13
Bpl_scaf_34304-0.38
Bpl_scaf_34304-0.9PROTEIN G1-LIKE2
Bpl_scaf_34314-0.12TETRASPANIN
Bpl_scaf_34314-0.13THROMBOSPONDIN
Bpl_scaf_34314-0.7
Bpl_scaf_34315-0.6THIOESTERASE
Bpl_scaf_34315-0.8
Bpl_scaf_34315-0.9PROTEASOME SUBUNIT ALPHA/BETA
Bpl_scaf_34315-1.12CARBONIC ANHYDRASE
Bpl_scaf_34315-1.13TRANSIENT RECEPTOR POTENTIAL CHANNEL 4-ASSOCIATED PROTEIN TCPC4AP
Bpl_scaf_34315-2.103-KETODIHYDROSPHINGOSINE REDUCTASE
Bpl_scaf_34315-2.11DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1
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