About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_34935-0.14
Bpl_scaf_3495-0.0ZINC FINGER PROTEIN ZIC AND GLI
Bpl_scaf_3495-0.3
Bpl_scaf_3495-1.0
Bpl_scaf_3495-1.7
Bpl_scaf_3496-0.1
Bpl_scaf_3496-0.2
Bpl_scaf_3496-1.10
Bpl_scaf_3496-1.15
Bpl_scaf_3496-1.29BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_3496-1.31
Bpl_scaf_3496-1.40ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_3496-1.42METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_3496-1.9
Bpl_scaf_34973-0.0
Bpl_scaf_34973-0.1
Bpl_scaf_34973-0.3
Bpl_scaf_34981-0.10PUTATIVE-RELATED
Bpl_scaf_34981-0.12
Bpl_scaf_34990-0.0
Bpl_scaf_34995-0.2
Bpl_scaf_34995-0.6POLYCYSTIN-1
Bpl_scaf_35002-0.1FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
Bpl_scaf_35002-0.4
Bpl_scaf_35002-0.8HOMEOBOX PROTEIN ARISTALESS
Bpl_scaf_35015-0.0
Bpl_scaf_35027-0.10LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_35027-0.15
Bpl_scaf_35027-0.16
Bpl_scaf_35027-0.9GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_35049-0.17PIKACHURIN-LIKE PROTEIN
Bpl_scaf_35076-0.13
Bpl_scaf_35076-0.16UNCHARACTERIZED
Bpl_scaf_35076-0.17
Bpl_scaf_35076-0.5CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_35087-0.12
Bpl_scaf_35087-0.15
Bpl_scaf_35095-0.5GASDERMIN
Bpl_scaf_35095-0.7
Bpl_scaf_3511-0.3
Bpl_scaf_3511-0.8
Bpl_scaf_35114-0.0
Bpl_scaf_35114-0.1
Bpl_scaf_35114-0.13
Bpl_scaf_35114-0.2
Bpl_scaf_35114-0.3
Bpl_scaf_35123-0.15PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_35123-0.2PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_35123-0.25PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_35123-0.3
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