About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_37633-0.7
Bpl_scaf_37634-0.5
Bpl_scaf_37635-0.3
Bpl_scaf_37637-0.2CEREBELLIN-RELATED
Bpl_scaf_37637-0.4CEREBELLIN-RELATED
Bpl_scaf_37640-0.3
Bpl_scaf_37640-0.5
Bpl_scaf_37643-0.10BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_37643-0.11ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_37643-1.18
Bpl_scaf_37643-1.2
Bpl_scaf_37643-1.20
Bpl_scaf_37643-1.4
Bpl_scaf_37643-1.5
Bpl_scaf_37643-3.0
Bpl_scaf_37643-3.1
Bpl_scaf_37643-3.19RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_37643-3.20BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_37643-3.3
Bpl_scaf_37644-0.5
Bpl_scaf_37646-0.0
Bpl_scaf_37646-0.5POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_37647-0.5
Bpl_scaf_37649-0.0
Bpl_scaf_37650-0.1
Bpl_scaf_37651-0.1
Bpl_scaf_37652-0.5MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_37654-0.0SOLUTE CARRIER FAMILY 13 MEMBER
Bpl_scaf_37654-0.1
Bpl_scaf_37654-1.8FATTY ACID BINDING PROTEIN
Bpl_scaf_37654-2.10
Bpl_scaf_37654-2.11COLLAGEN ALPHA
Bpl_scaf_37654-3.21CARBOXYLESTERASE
Bpl_scaf_37654-3.3
Bpl_scaf_37654-3.31NUCLEOREDOXIN
Bpl_scaf_37654-3.45TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_37654-3.46
Bpl_scaf_37654-3.47CARBOXYLESTERASE
Bpl_scaf_37654-3.49CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_37654-3.50TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_37654-3.52VASCULAR CELL ADHESION MOLECULE 1
Bpl_scaf_37654-3.53IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_37655-0.5
Bpl_scaf_37665-0.8
Bpl_scaf_37668-0.2
Bpl_scaf_37668-0.6
Bpl_scaf_37676-0.1
Bpl_scaf_37679-0.3
Bpl_scaf_37690-0.15KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING
Bpl_scaf_37690-0.18
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