About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides61054PROTEIN B, PUTATIVE-RELATED-RELATED
Paelopatides61055IP13529P
Paelopatides61056-
Paelopatides61057-
Paelopatides61058-
Paelopatides61059EXPRESSED PROTEIN
Paelopatides61060-
Paelopatides61061ALANYL-TRNA EDITING PROTEIN
Paelopatides61062-
Paelopatides61063PROTEIN, PUTATIVE-RELATED
Paelopatides61064BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides61065-
Paelopatides61066GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides61067PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides61068CASEIN KINASE II SUBUNIT BETA
Paelopatides61069ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides61070ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides61071COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides61072ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides61073SI:CH211-108C17.2-RELATED-RELATED
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