About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides61013B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides61014B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides61016PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides6101752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides61018-
Paelopatides61019-
Paelopatides61020SI:CH211-196P9.1-RELATED
Paelopatides61021CENTROSOMAL PROTEIN OF 76 KDA
Paelopatides61022REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides61023HOMEOBOX PROTEIN SIX
Paelopatides61024PROTEIN CBG26694
Paelopatides61025-
Paelopatides61026EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
Paelopatides61027-
Paelopatides61028-
Paelopatides61029PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides61030-
Paelopatides61031ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides61032-
Paelopatides61033-
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