About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60910PROTEIN CBG26694
Paelopatides60911PROTEIN CBG26694
Paelopatides60912LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides60913-
Paelopatides60914FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides60915RNA BINDING PROTEIN
Paelopatides60916AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28
Paelopatides60917TETRATRICOPEPTIDE REPEAT PROTEIN
Paelopatides60918RNA METHYLASE-RELATED
Paelopatides60919PROTEIN CBG26694
Paelopatides60920P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN
Paelopatides60921PEFLIN
Paelopatides60922EPM2A-INTERACTING PROTEIN 1
Paelopatides60923PROTEIN CBG26694
Paelopatides60924L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides60925-
Paelopatides60926BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2
Paelopatides60927E3 UBIQUITIN-PROTEIN LIGASE TOPORS
Paelopatides60928-
Paelopatides60929-
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