About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60868ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides60869BUCENTAUR RELATED
Paelopatides60870PROTEIN SSUH2 HOMOLOG
Paelopatides60871CYCLIN
Paelopatides60872ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides60873-
Paelopatides60874-
Paelopatides60875DYNEIN HEAVY CHAIN
Paelopatides60876-
Paelopatides60877-
Paelopatides60878METHIONINE AMINOPEPTIDASE
Paelopatides60879-
Paelopatides60880-
Paelopatides60881HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER
Paelopatides60882-
Paelopatides60883ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides60884BUCENTAUR RELATED
Paelopatides60885CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED
Paelopatides60886-
Paelopatides60887-
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