About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60828-
Paelopatides60829ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides60830-
Paelopatides60831TRANSPOSON
Paelopatides60832TRANSPOSON
Paelopatides60833TRANSPOSON
Paelopatides60834-
Paelopatides60835PROTEIN CBG26694
Paelopatides60836-
Paelopatides60837RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides60838RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides60839-
Paelopatides60840TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides60841TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides6084250S RIBOSOMAL PROTEIN L3
Paelopatides60843-
Paelopatides60844FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides60845CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60846-
Paelopatides60847-
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