About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60746DNA REPLICATION FACTOR CDT1
Paelopatides60747HYR DOMAIN-CONTAINING PROTEIN
Paelopatides60748DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides60749HYR DOMAIN-CONTAINING PROTEIN
Paelopatides60750FI04643P-RELATED
Paelopatides60751ENOYL-COA HYDRATASE-RELATED
Paelopatides6075252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides60753PLACENTAL PROTEIN 11-RELATED
Paelopatides60754REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60755-
Paelopatides60757-
Paelopatides60758-
Paelopatides60759MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
Paelopatides60760-
Paelopatides60761UNCHARACTERIZED
Paelopatides60762GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides60763PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides60764CELL DIVISION PROTEIN KINASE
Paelopatides60765-
Paelopatides60766REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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