About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60703REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60704-
Paelopatides60705CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides60706-
Paelopatides60710-
Paelopatides60711-
Paelopatides60712-
Paelopatides60713HELICASE SRCAP-RELATED
Paelopatides60714-
Paelopatides60715-
Paelopatides60716HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides60717-
Paelopatides60718UNCHARACTERIZED
Paelopatides60719RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides60720-
Paelopatides60721SI:CH211-196P9.1-RELATED
Paelopatides60722IP13529P
Paelopatides60723-
Paelopatides60724BONUS, ISOFORM C-RELATED
Paelopatides60725IP13529P
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