About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60683PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides60684MIP11318P
Paelopatides60685-
Paelopatides60686RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
Paelopatides60687PROTEIN CBG26694
Paelopatides60688RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
Paelopatides60689REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60690ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides60691-
Paelopatides60692ANOSMIN
Paelopatides60693-
Paelopatides60694CULLIN
Paelopatides60695REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60696IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides60697-
Paelopatides60698-
Paelopatides60699EPM2A-INTERACTING PROTEIN 1
Paelopatides60700ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides60701-
Paelopatides60702-
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