About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60848-
Paelopatides60849TYROSINE-PROTEIN KINASE
Paelopatides60850REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60851REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60852REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides60853PARANEOPLASTIC ANTIGEN
Paelopatides60854POL PROTEIN
Paelopatides60855NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides60856-
Paelopatides60857-
Paelopatides60858ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides60859ENDONUCLEASE-RELATED
Paelopatides60860PROTEIN CBG26694
Paelopatides60861-
Paelopatides60862GRAM DOMAIN-CONTAINING PROTEIN 4
Paelopatides60863-
Paelopatides60864DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides60865-
Paelopatides60866-
Paelopatides60867-
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