About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59963ADHESION G-PROTEIN COUPLED RECEPTOR V1
Paelopatides59964-
Paelopatides59965ADHESION G-PROTEIN COUPLED RECEPTOR V1
Paelopatides59966CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59967SERYL-TRNA SYNTHETASE
Paelopatides59968FIBROUS SHEATH CABYR-BINDING PROTEIN
Paelopatides59969SERYL-TRNA SYNTHETASE
Paelopatides59970QUINONE OXIDOREDUCTASE
Paelopatides59971REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59972ARFAPTIN-RELATED
Paelopatides59973ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59974ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59975ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides59976BUCENTAUR RELATED
Paelopatides59977REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59978NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides59979-
Paelopatides59980UNCHARACTERIZED
Paelopatides59981RIBOSOME BIOGENESIS PROTEIN BRIX
Paelopatides59982TRANSPOSON TY3-I GAG-POL POLYPROTEIN
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