About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59878HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides59879N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides59880-
Paelopatides59881-
Paelopatides59882-
Paelopatides59883-
Paelopatides59884-
Paelopatides59885HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H
Paelopatides59886-
Paelopatides59887CENTROSOMAL PROTEIN OF 128 KDA
Paelopatides59888DNA POLYMERASE TYPE-X FAMILY MEMBER
Paelopatides59889-
Paelopatides59890-
Paelopatides59891RCC1 DOMAIN-CONTAINING PROTEIN 1
Paelopatides59892DNA POLYMERASE TYPE-X FAMILY MEMBER
Paelopatides59893SMALL INTEGRAL MEMBRANE PROTEIN 8
Paelopatides59894SPORE COAT PROTEIN SP85
Paelopatides59895S-ANTIGEN PROTEIN
Paelopatides59896-
Paelopatides59897TYROSINE-PROTEIN KINASE RECEPTOR
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