About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59815OXIDOREDUCTASES
Paelopatides59816OXIDOREDUCTASES
Paelopatides59817NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides59818ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides59819-
Paelopatides59820-
Paelopatides59821-
Paelopatides59822-
Paelopatides59823REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59824-
Paelopatides59825-
Paelopatides59826EPM2A-INTERACTING PROTEIN 1
Paelopatides59830-
Paelopatides59831FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59832ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides59833-
Paelopatides59834ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides59835GEO11136P1-RELATED
Paelopatides59836UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE
Paelopatides59837MAP/MICROTUBULE AFFINITY-REGULATING KINASE
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