About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59938ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides59939-
Paelopatides59941-
Paelopatides59942-
Paelopatides59943SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59945DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides59947COILED-COIL DOMAIN-CONTAINING PROTEIN 102A
Paelopatides59948-
Paelopatides59951-
Paelopatides59952IP13529P
Paelopatides59953-
Paelopatides59954SI:CH211-196P9.1-RELATED
Paelopatides59955-
Paelopatides59956GAG-RELATED PROTEIN
Paelopatides59957ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59958-
Paelopatides59959FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59960-
Paelopatides59961WNT RELATED
Paelopatides59962ADHESION G-PROTEIN COUPLED RECEPTOR V1
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