About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59983-
Paelopatides59984SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
Paelopatides59985F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59986-
Paelopatides59987F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides59988-
Paelopatides59989PROTEIN CBG26694
Paelopatides59990SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1
Paelopatides59991-
Paelopatides59992SERINE/THREONINE-PROTEIN KINASE PLK
Paelopatides59993-
Paelopatides599945'-NUCLEOTIDASE-RELATED
Paelopatides59995MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides59996C-TYPE LECTIN SUPERFAMILY MEMBER
Paelopatides59997-
Paelopatides59998-
Paelopatides59999NETRIN RECEPTOR UNC5
Paelopatides60000ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides60001ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides60002ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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