Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8011226.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011222.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011223.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011224.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011220.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011227.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011221.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011228.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8011229.1 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| CAI8011231.1 | JOUBERIN |
| CAI8011230.1 | JOUBERIN |
| CAI8011232.1 | |
| CAI8011233.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 22 |
| CAI8011235.1 | |
| CAI8011234.1 | |
| CAI8011241.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011240.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011239.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011238.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011237.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011236.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011243.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011242.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011244.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011245.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011251.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011252.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011250.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011249.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011248.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011247.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011246.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011253.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011254.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011255.1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| CAI8011256.1 | |
| CAI8011257.1 | |
| CAI8011258.1 | HEMK METHYLTRANSFERASE |
| CAI8011259.1 | |
| CAI8011260.1 | |
| CAI8011261.1 | XANTHINE DEHYDROGENASE SUBUNIT C-RELATED |
| CAI8011262.1 | |
| CAI8011263.1 | PHOSPHOTRIESTERASE-RELATED |
| CAI8011264.1 | PROTEIN NRFC |
| CAI8011265.1 | |
| CAI8011266.1 | THIOSULFATE SULFURTRANSFERASE |
| CAI8011267.1 | |
| CAI8011269.1 | |
| CAI8011268.1 | |
| CAI8011272.1 | LIPOPROTEIN-RELEASING SYSTEM ATP-BINDING PROTEIN LOLD |
