Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010921.1 | |
| CAI8010922.1 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
| CAI8010925.1 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 |
| CAI8010924.1 | |
| CAI8010923.1 | |
| CAI8010926.1 | |
| CAI8010928.1 | |
| CAI8010927.1 | |
| CAI8010929.1 | |
| CAI8010930.1 | P2X PURINOCEPTOR |
| CAI8010931.1 | P2X PURINOCEPTOR |
| CAI8010932.1 | P2X PURINOCEPTOR |
| CAI8010934.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010935.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010933.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010936.1 | LD33804P |
| CAI8010937.1 | INDOLEAMINE 2,3-DIOXYGENASE |
| CAI8010938.1 | |
| CAI8010939.1 | |
| CAI8010940.1 | |
| CAI8010943.1 | MYOTROPHIN |
| CAI8010942.1 | MOLTING PROTEIN MLT-4 |
| CAI8010944.1 | MYOTROPHIN |
| CAI8010941.1 | |
| CAI8010945.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8010946.1 | |
| CAI8010948.1 | CYTOCHROME P450 |
| CAI8010947.1 | CYTOCHROME P450 FAMILY 3 |
| CAI8010950.1 | CYTOCHROME P450 FAMILY 3 |
| CAI8010949.1 | CYTOCHROME P450 FAMILY 3 |
| CAI8010951.1 | CYTOCHROME P450 |
| CAI8010952.1 | CYTOCHROME P450 |
| CAI8010954.1 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| CAI8010953.1 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| CAI8010955.1 | |
| CAI8010957.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| CAI8010956.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| CAI8010958.1 | MOLTING PROTEIN MLT-4 |
| CAI8010959.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| CAI8010960.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| CAI8010961.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
| CAI8010965.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8010964.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8010963.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8010962.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8010966.1 | |
| CAI8010967.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8010968.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010969.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8010970.1 |
