Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010821.1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER |
| CAI8010822.1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER |
| CAI8010823.1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER |
| CAI8010825.1 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| CAI8010824.1 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| CAI8010827.1 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
| CAI8010826.1 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
| CAI8010828.1 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
| CAI8010835.1 | AGAP003710-PA |
| CAI8010832.1 | AGAP003710-PA |
| CAI8010833.1 | AGAP003710-PA |
| CAI8010830.1 | AGAP003710-PA |
| CAI8010834.1 | AGAP003710-PA |
| CAI8010831.1 | AGAP003710-PA |
| CAI8010829.1 | AGAP003710-PA |
| CAI8010836.1 | |
| CAI8010837.1 | |
| CAI8010839.1 | |
| CAI8010838.1 | |
| CAI8010840.1 | |
| CAI8010841.1 | |
| CAI8010842.1 | |
| CAI8010845.1 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| CAI8010844.1 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| CAI8010843.1 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| CAI8010846.1 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| CAI8010847.1 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| CAI8010848.1 | SIALIDASE |
| CAI8010849.1 | |
| CAI8010850.1 | |
| CAI8010852.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8010851.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8010855.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8010854.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8010853.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8010856.1 | |
| CAI8010857.1 | |
| CAI8010861.1 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
| CAI8010860.1 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
| CAI8010859.1 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
| CAI8010858.1 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
| CAI8010862.1 | |
| CAI8010863.1 | |
| CAI8010864.1 | SUBTILISIN-RELATED |
| CAI8010865.1 | |
| CAI8010866.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8010867.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8010871.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8010872.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8010870.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
