Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010572.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
| CAI8010571.1 | SI:CH211-189E2.2 |
| CAI8010570.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8010574.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8010575.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8010576.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8010577.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8010578.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8010579.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8010580.1 | |
| CAI8010582.1 | |
| CAI8010581.1 | |
| CAI8010583.1 | UNCHARACTERIZED |
| CAI8010584.1 | |
| CAI8010587.1 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| CAI8010585.1 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| CAI8010586.1 | PROTEIN SIDEKICK |
| CAI8010588.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8010590.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8010589.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8010591.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8010592.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8010593.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8010594.1 | |
| CAI8010595.1 | INTRAFLAGELLAR TRANSPORT PROTEIN 25 HOMOLOG |
| CAI8010597.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8010596.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8010598.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8010600.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8010599.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| CAI8010601.1 | |
| CAI8010602.1 | |
| CAI8010604.1 | HRAS-LIKE SUPPRESSOR - RELATED |
| CAI8010603.1 | |
| CAI8010605.1 | ENDONUCLEASE V |
| CAI8010606.1 | ENDONUCLEASE V |
| CAI8010607.1 | ENDONUCLEASE V |
| CAI8010608.1 | HRAS-LIKE SUPPRESSOR - RELATED |
| CAI8010609.1 | ENDONUCLEASE V |
| CAI8010610.1 | |
| CAI8010611.1 | |
| CAI8010613.1 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
| CAI8010615.1 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
| CAI8010612.1 | |
| CAI8010614.1 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
| CAI8010618.1 | |
| CAI8010617.1 | |
| CAI8010616.1 | |
| CAI8010619.1 | |
| CAI8010620.1 |
