Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010521.1 | |
| CAI8010525.1 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| CAI8010524.1 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| CAI8010523.1 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| CAI8010526.1 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| CAI8010527.1 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| CAI8010522.1 | |
| CAI8010537.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010532.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010534.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010533.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010535.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010536.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8010530.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010531.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8010529.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010528.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010538.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010539.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010540.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8010541.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8010542.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010544.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010543.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010545.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010546.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010547.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010548.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010549.1 | 26S PROTEASOME REGULATORY SUBUNIT |
| CAI8010550.1 | |
| CAI8010551.1 | |
| CAI8010552.1 | |
| CAI8010553.1 | |
| CAI8010556.1 | OS02G0815200 PROTEIN |
| CAI8010555.1 | |
| CAI8010554.1 | |
| CAI8010557.1 | |
| CAI8010558.1 | |
| CAI8010559.1 | |
| CAI8010560.1 | |
| CAI8010561.1 | |
| CAI8010566.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| CAI8010564.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| CAI8010563.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| CAI8010562.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| CAI8010565.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| CAI8010567.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| CAI8010569.1 | MYOTUBULARIN-RELATED |
| CAI8010568.1 | MYOTUBULARIN-RELATED |
| CAI8010573.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
