Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010221.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8010222.1 | NURIM |
| CAI8010223.1 | NURIM |
| CAI8010225.1 | MICROTUBULE ASSOCIATED PROTEIN XMAP215 |
| CAI8010224.1 | |
| CAI8010226.1 | |
| CAI8010227.1 | |
| CAI8010228.1 | DNA REPAIR-SCAFFOLDING PROTEIN SPIDR |
| CAI8010229.1 | CTF8, CHROMOSOME TRANSMISSION FIDELITY FACTOR 8 HOMOLOG (S. CEREVISIAE) |
| CAI8010231.1 | CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 |
| CAI8010232.1 | CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 |
| CAI8010230.1 | CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 |
| CAI8010234.1 | |
| CAI8010233.1 | |
| CAI8010235.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010236.1 | |
| CAI8010237.1 | GABA-B RECEPTOR |
| CAI8010239.1 | GABA-B RECEPTOR |
| CAI8010238.1 | GABA-B RECEPTOR |
| CAI8010240.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8010241.1 | TYROSINE-PROTEIN KINASE |
| CAI8010244.1 | - |
| CAI8010243.1 | - |
| CAI8010242.1 | - |
| CAI8010245.1 | EIF4G DOMAIN PROTEIN |
| CAI8010246.1 | |
| CAI8010254.1 | SSM4 PROTEIN |
| CAI8010253.1 | SSM4 PROTEIN |
| CAI8010252.1 | SSM4 PROTEIN |
| CAI8010251.1 | SSM4 PROTEIN |
| CAI8010250.1 | SSM4 PROTEIN |
| CAI8010249.1 | SSM4 PROTEIN |
| CAI8010248.1 | SSM4 PROTEIN |
| CAI8010247.1 | SSM4 PROTEIN |
| CAI8010255.1 | SSM4 PROTEIN |
| CAI8010256.1 | SSM4 PROTEIN |
| CAI8010257.1 | SSM4 PROTEIN |
| CAI8010258.1 | SSM4 PROTEIN |
| CAI8010259.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8010260.1 | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN |
| CAI8010263.1 | CODANIN-1 |
| CAI8010262.1 | CODANIN-1 |
| CAI8010261.1 | CODANIN-1 |
| CAI8010264.1 | CODANIN-1 |
| CAI8010265.1 | |
| CAI8010266.1 | CODANIN-1 |
| CAI8010267.1 | CODANIN-1 |
| CAI8010268.1 | CODANIN-1 |
| CAI8010269.1 | |
| CAI8010270.1 |
