Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8009932.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009930.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009931.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009926.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009928.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009927.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009925.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009923.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009922.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009929.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009924.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009921.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009919.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009920.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009935.1 | |
| CAI8009936.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8009937.1 | ALLANTOINASE |
| CAI8009938.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8009939.1 | BIFUNCTIONAL PROTEIN PYRR |
| CAI8009940.1 | SUCCINYL-COA--D-CITRAMALATE COA-TRANSFERASE |
| CAI8009941.1 | INNER MEMBRANE PROTEIN YGIH |
| CAI8009942.1 | LD24721P |
| CAI8009944.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8009943.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8009945.1 | |
| CAI8009946.1 | |
| CAI8009947.1 | SULFATE ADENYLYLTRANSFERASE |
| CAI8009948.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8009949.1 | ZGC:162816-RELATED |
| CAI8009950.1 | UPF0145 PROTEIN YBJQ |
| CAI8009951.1 | UPF0145 PROTEIN YBJQ |
| CAI8009952.1 | |
| CAI8009953.1 | |
| CAI8009954.1 | RNA POLYMERASE ECF-TYPE SIGMA FACTO |
| CAI8009955.1 | CELL DIVISION CYCLE 16,23,27 |
| CAI8009956.1 | CARTILAGE ACIDIC PROTEIN 1 |
| CAI8009957.1 | CARTILAGE ACIDIC PROTEIN 1 |
| CAI8009958.1 | PYRUVATE CARBOXYLASE SUBUNIT A |
| CAI8009959.1 | OXALOACETATE DECARBOXYLASE ALPHA CHAIN |
| CAI8009960.1 | |
| CAI8009962.1 | EXOSOME COMPLEX COMPONENT |
| CAI8009961.1 | EXOSOME COMPLEX COMPONENT |
| CAI8009963.1 | BLL2463 PROTEIN |
| CAI8009964.1 | BLL2464 PROTEIN |
| CAI8009965.1 | |
| CAI8009966.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| CAI8009967.1 | |
| CAI8009968.1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURL |
| CAI8009969.1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE |
| CAI8009971.1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE |
