Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8010171.1 | |
| CAI8010172.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8010173.1 | ABC TRANSPORTER, PERMEASE PROTEIN |
| CAI8010175.1 | CARBOHYDRATE TRANSPORT ATP-BINDING PROTEIN MG119-RELATED |
| CAI8010174.1 | CARBOHYDRATE TRANSPORT ATP-BINDING PROTEIN MG119-RELATED |
| CAI8010176.1 | N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED |
| CAI8010177.1 | SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA |
| CAI8010178.1 | |
| CAI8010179.1 | SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN |
| CAI8010180.1 | PIKACHURIN-LIKE PROTEIN |
| CAI8010181.1 | PIKACHURIN-LIKE PROTEIN |
| CAI8010182.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010183.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010184.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010185.1 | |
| CAI8010186.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8010187.1 | |
| CAI8010188.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010189.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010190.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010191.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010195.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010194.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010193.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010192.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010197.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010196.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| CAI8010199.1 | DEP DOMAIN-CONTAINING |
| CAI8010200.1 | DEP DOMAIN-CONTAINING |
| CAI8010198.1 | DEP DOMAIN-CONTAINING |
| CAI8010201.1 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
| CAI8010202.1 | |
| CAI8010204.1 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
| CAI8010203.1 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
| CAI8010205.1 | |
| CAI8010206.1 | TENASCIN |
| CAI8010207.1 | CYTOKINE RECEPTOR |
| CAI8010208.1 | |
| CAI8010210.1 | |
| CAI8010209.1 | |
| CAI8010211.1 | |
| CAI8010212.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8010213.1 | |
| CAI8010214.1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28 |
| CAI8010215.1 | CENTROSOMAL PROTEIN OF 290 KDA |
| CAI8010216.1 | |
| CAI8010217.1 | GLYOXALASE FAMILY PROTEIN |
| CAI8010218.1 | MONOACYLGLYCEROL LIPASE |
| CAI8010219.1 | |
| CAI8010220.1 | LUCIFERASE-LIKE MONOOXYGENASE |
